Persistent Identifier
|
hdl:20.500.11766.1/FK2/X9FIXB |
Publication Date
|
2023-02-03 |
Title
| Genetic diversity study in Napier grass collections and progeny plants |
Other Identifier
| MEL: 36811
Other: https://data.ilri.org/portal/dataset/geneticdiversitynapier
Other: https://hpc.ilri.cgiar.org/~mshehabu/napier-grass-GBS-data-2019/ |
Author
| Jones, Chris (International Livestock Research Institute - ILRI)
Muktar, Meki (International Livestock Research Institute - ILRI)
Gari, Abel (International Livestock Research Institute - ILRI)
Hanson, Jean (International Livestock Research Institute - ILRI)
Negawo, Alemayehu Teressa (International Livestock Research Institute - ILRI)
Domelevo Entfellner, Jean-Baka (Biosciences Eastern and Central Africa - BeCA)
Lee, Ki-won (Rural Development Administration - RDA KR)
Habte, Ermias (International Livestock Research Institute - ILRI) |
Point of Contact
|
Use email button above to contact.
Muktar, Meki (International Livestock Research Institute - ILRI) |
Description
| Genetic diversity study in Napier grass collections and progeny plants. The dataset contains genome-wide sequence tags, in FASTQ file format, generated from the genotyping of 258 Napier grass accessions on the DArTseq genotyping-by-sequencing platform. Of these, sequence tags representing 105 Napier grass accessions have been published previously (see doi.org:10.1038/s41598-019-43406-0). The remaining 153 accessions are Napier grass progeny plants raised from seeds of 13 mother plants from the ILRI collection. |
Subject
| Agricultural Sciences |
Keyword
| genebanks (AGROVOC) http://aims.fao.org/aos/agrovoc/c_11116
feed crops (AGROVOC) http://aims.fao.org/aos/agrovoc/c_2829
collections (AGROVOC) http://aims.fao.org/aos/agrovoc/c_1756
pennisetum purpureum (AGROVOC) http://aims.fao.org/aos/agrovoc/c_5677
dna sequences (AGROVOC) http://aims.fao.org/aos/agrovoc/c_27812
cenchrus purpureus |
Related Publication
| Muktar, M.S., Teshome, A., Hanson, J. et al. Genotyping by sequencing provides new insights into the diversity of Napier grass (Cenchrus purpureus) and reveals variation in genome-wide LD patterns between collections. Sci Rep 9, 6936 (2019). doi: 10.1038/s41598-019-43406-0 https://doi.org/10.1038/s41598-019-43406-0 |
Notes
| Type: Dataset; Sub-type(s): Other (Genomic or Genetics data) |
Language
| English |
Producer
| International Livestock Research Institute (ILRI) http://www.ilri.org/ 
|
Production Date
| 2020-03-04 |
Contributor
| Data Curator : Chris Jones (International Livestock Research Institute - ILRI)
Data Curator : Meki Shehabu Muktar (International Livestock Research Institute - ILRI)
Funder : CGIAR Research Program on Livestock Agri-Food Systems - Livestock
Project Manager : Chris Jones (International Livestock Research Institute - ILRI) |
Deposit Date
| 2023-02-03 |
Time Period
| Start Date: 2017-01-01 ; End Date: 2020-03-04 |